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Polymorphisms and Schizophrenia—The Ups and Downs of Neuregulin Expression

21 April 2006. Since single nucleotide polymorphisms (SNPs) in the gene for neuregulin 1 (NRG1) were linked to increased risk for schizophrenia, scientists have struggled to explain exactly how those SNPs might relate to the disease at a biological level. The problem is that the SNPs do not lie in the coding region of the gene, but upstream. This has led to suggestions that the nucleotide changes may alter expression of neuregulin. Now, in an April 25 PNAS paper, currently available online (and first reported in our Neurosciences 2005 coverage), researchers report that they have addressed that theory in a large sample of postmortem brains. Amanda Law and colleagues from Oxford University, England, and the National Institutes of Health, Bethesda, Maryland, have analyzed SNPs and measured NRG1 isoform expression in postmortem hippocampal samples from more than 80 controls and 40 schizophrenia patients. So does aberrant expression of NRG1 explain why these SNPs increase risk for the disease? The answer appears to be yes…and no.

Law and colleagues measured hippocampal expression of four major isoforms of neuregulin (type I – IV). In a subset of samples (53 controls and 38 patients), they found that mRNA for the type I isoform is slightly, though significantly higher in patient tissue. On average, that slight increase is 34 percent, though deviations from the mean are quite large. The authors report finding a similar relationship when they examined samples from the full cohort (n = 84 for controls, n = 44 for patients). None of the other three isoforms showed any expression differences between patient and controls. Researchers from the same group have previously reported that type I NRG1 is also increased slightly in the prefrontal cortex in the disease (see Hashimoto et al., 2004). Both the prefrontal cortex and the hippocampus have been linked to the psychopathology of the disease.

When Law and colleagues examined the effects of the risk alleles on type I NRG1 expression, they found that the relationship was quite complex and not easily reconciled with disease susceptibility. The authors found that one of the original five SNPs identified as increasing risk for schizophrenia (see Stefansson et al., 2002) did seem to alter gene expression but not in the same way in patients and controls. Patients homozygous for the risk allele of this SNP (SNP8NRG221132) had slightly higher type I expression than patients who were heterozygous for the allele—this difference was not significant. But in control cases the trend was in the opposite direction—those homozygous for the high-risk allele actually had significantly lower expression of type I NRG1. “At present, the relevance of and an explanation for these findings is obscure,” write the authors in their supplementary discussion, which can be found at the PNAS website. But one possibility that they put forth is that other factors driving increased expression of NRG1 in schizophrenia patients may be masking the effect of the high-risk allele seen in normal controls. If this turns out to be true, then the risk allele (a guanine nucleotide instead of adenine) would be predicted to decrease NRG1 expression.

In the case of type IV NRG1, the opposite seems to be the case. The authors found that increased expression of the type IV isoform was associated with the risk allele for a second SNP, SNP8NRG243177. The presence of the high-risk thymine instead of cytosine at this position was correlated with higher levels of type IV NRG1 in both patients and controls, and there is evidence of a dose effect: T/T homozygotes have highest expression followed by C/T heterozygotes and C/C homozygotes. Though this trend appeared more pronounced in patients, the authors did not find any strong relationship between SNP genotype and diagnosis of schizophrenia. Nevertheless, in the total cohort (patients and controls), the difference between type IV NRG1 expression in the two homozygote groups reached statistical significance, indicating that the risk allele does increase type IV NRG1 expression. Given that the risk allele has similar effects in both patients and normal controls, additional factors must contribute to pathology in patients.

How might these SNPs affect expression of the different isoforms of neuregulin? The authors note that both lie in nucleotide motifs that are recognized by a variety of transcription factors. SNP8NRG221132, for example, lies in a region recognized by serum response factor (SRF), and the high-risk allele is predicted to remove binding of this transcription factor and therefore reduce expression of neuregulin. The presence of SNP8NRG243177, on the other hand, is predicted to increase binding of high-mobility group box protein-1, which would fit with the increased expression of type IV NRG1 that appears to be elicited by this SNP. The differential effects of the SNPs on different isoforms may be related to the complex alternative splicing of this gene, which is governed by alternative promoter usage.

But the situation is slightly more complex, because SNP8NRG243177 also lies in a second SRF-binding motif and is predicted to abolish SRF binding also. All told, the interplay among high-risk SNPs, differential promoter usage, NRG1 expression, and schizophrenia is turning out to be extremely complex. Nonetheless, the authors conclude “…that the mechanism behind the clinical association of NRG1 with schizophrenia is altered transcriptional regulation, which modifies, probably to a small degree and in an isoform-limited fashion, the efficiency of NRG1 signaling effects on neural development and plasticity.”—Tom Fagan.

Reference:
Law AJ, Lipska BK, Weickert CS, Hyde TM, Straub RE, Hashimoto R, Harrison PJ, Kleinman JE, Weinberger DR. Neuregulin 1 transcripts are differentially expressed in schizophrenia and regulated by 5’ SNPs associated with the disease. PNAS April 25, 2006;103:6747-6752. Abstract

 
Comments on News and Primary Papers
Comment by:  William Carpenter, SRF Advisor (Disclosure)
Submitted 22 April 2006 Posted 22 April 2006
  I recommend the Primary Papers

Comment by:  Stephan Heckers, SRF Advisor
Submitted 29 April 2006 Posted 29 April 2006
  I recommend the Primary Papers

The gene Neuregulin 1 (NRG1) on chromosome 8p has been identified as one of the risk genes for schizophrenia. It is unclear how the DNA sequence variation linked to schizophrenia leads to abnormalities of mRNA expression. This would be important to know, in order to understand the downstream effects of the neuregulin gene on neuronal functioning in schizophrenia.

Law and colleagues explored this question in post-mortem specimens of the hippocampus of control subjects and patients with schizophrenia. This elegant study of the expression of four types of NRG1 mRNA (types I-IV) is exactly what we need to translate findings from the field of human genetics into the field of schizophrenia neuropathology. The findings are complex and cannot be translated easily into a model of neuregulin dysfunction in schizophrenia. I would like to highlight two findings.

First, the level of NRG1 type I mRNA expression was increased in the hippocampus of schizophrenia patients. This confirms an earlier study of NRG1 mRNA expression in schizophrenia. It remains to be seen how this change in...  Read more


View all comments by Stephan Heckers

Comment by:  Bryan Roth, SRF Advisor
Submitted 5 May 2006 Posted 5 May 2006
  I recommend the Primary Papers

I think this is a very interesting and potentially significant paper. It is important to point out, however, that it deals with changes in mRNA abundance rather than alterations in neuregulin protein expression. No measures of isoform protein expression were performed, and it is conceivable that neuregulin isoform protein expression could be increased, decreased, or not changed. A second point is that although statistically significant changes in mRNA were measured, they are modest.

Finally, although multiple comparisons were performed, the authors chose not to perform Bonferroni corrections, noting in the primary paper that, "Correction for random effects, such as Bonferroni correction, would be an excessively conservative approach, particularly given that we have restricted our primary analyses to planned comparisons (based on strong prior clinical association and physical location of the SNPs) of four SNPs and a single haplotype comprised of these SNPs. Because the SNPs are in moderate LD, the degree of independence between markers is low and, therefore, correcting for...  Read more


View all comments by Bryan Roth

Comment by:  Patricia Estani
Submitted 9 June 2007 Posted 10 June 2007
  I recommend the Primary Papers
Comments on Related News
Related News: SfN 2005: Cortical Deficits in Schizophrenia: Have Genes, Will Hypothesize

Comment by:  Patricia Estani
Submitted 2 January 2006 Posted 2 January 2006
  I recommend the Primary Papers

Related News: Neuregulin Partner ErbB4 Spices Up Genetic Associations

Comment by:  Amanda Jayne Law, SRF Advisor
Submitted 22 February 2006 Posted 22 February 2006
  I recommend the Primary Papers

The study of Ghashghaei and colleagues provides a remarkable insight into the function of neuregulin 1 (NRG1), and NRG2 in adult neurogenesis. The study demonstrates that NRG1(2)/ErbB4 signaling influences the proliferation, differentiation, organization, and migration of adult neural progenitor cells in the subventricular zone (SVZ) and rostral migratory stream (RMS), in a ligand- and cell-dependent fashion. Using immunohistochemistry, Ghashghaei and colleagues first demonstrate that NRG1, NRG2, and ErbB4 are expressed by distinct cell types in the SVZ and RMS, notably ErbB4 and NRG1 by polysialylated neural cell adhesion molecule positive (PSA-NCAM+) neuroblasts, and ErbB2/3/4 by a subset of GFAP+ cells. These observations extend the group's previous studies of NRG1 and ErbB4 in the RMS (Anton et al., 2004). In their current study, Ghashghaei went on to examine the effects of exogenous infusion of NRG1 and NRG2 on neurogenesis in the RMS of adult mice. Interestingly, NRG1 was shown to decrease the...  Read more


View all comments by Amanda Jayne Law

Related News: Functional Neuregulin Variant Linked to Psychosis, Abnormal Brain Activation and IQ

Comment by:  Amanda Jayne Law, SRF Advisor
Submitted 8 November 2006 Posted 8 November 2006

Convergent evidence supporting the role of a schizophrenia-associated polymorphic variant in the NRG1 gene (SNP8NRG1243177) with the regulation of cortical function and the development of psychosis
The study of Hall and colleagues describes association of a schizophrenia-related polymorphism in the NRG1 gene promoter (SNP8NRG1243177) with cortical and cognitive dysfunction and the emergence of psychotic symptoms in young individuals at high genetic risk for developing schizophrenia. We have previously demonstrated that the same polymorphism (SNP8NRG1243177) and a 22kb risk haplotype, including this SNP, predicts transcription levels of a novel isoform of the NRG1 gene (Type IV) in the brain of patients with schizophrenia (Law et al., 2006; see SRF related news story). The SNP resides in the NRG1 promoter region for the novel E187 exon (Type IV) and our investigations indicate that the SNP is central to a regulatory...  Read more


View all comments by Amanda Jayne Law

Related News: Functional Neuregulin Variant Linked to Psychosis, Abnormal Brain Activation and IQ

Comment by:  Nicholas Stefanis
Submitted 16 November 2006 Posted 16 November 2006

The readers might find our results (now in press) interesting in the context of the brilliant work by Law and colleaguesLaw et al (2006)and now Hall and colleagues. We examined the potential impact of 18 single nucleotide polymorphisms (SNPs) within the DTNBP1, NRG1, DAOA/G32 and DAAO genes, on cognition and self-rated schizotypy, in a representative population of 2,243 young male military conscripts. Single SNP and haplotype associations were evaluated. The risk allele of functional SNP8NRG243177 was associated with reduced spatial working memory capacity.

This is of particular interest since it has recently been reported that SNP8NRG243177 is a functional polymorphism, the risk allele (T) predicting higher levels of type IV NRG1 mRNA expression (Law et al., 2006), and associated with lower prefrontal (and temporal) activation and development of psychotic symptoms in high risk individuals for schizophrenia (  Read more


View all comments by Nicholas Stefanis

Related News: Neuregulin and Schizophrenia—Functional Failure Fingers Risk Allele

Comment by:  Ali Mohamad Shariaty
Submitted 14 July 2007 Posted 14 July 2007

It is really a fascinating article which is a step towards understanding the molecular mechanisms underlying phenotypes of schizophrenia. Relating genotypes to phenotypes is really necessary for untangling the puzzle of a complex disorder. However, when a regulatory SNP interferes with normal binding of a transcription factor, is it understood that the transcription factor should play a role in brain and therefore in the molecular pathology of schizophrenia? Is there any direct role for involvement of serum response factor (SRF) in brain development or any neurological process?

View all comments by Ali Mohamad Shariaty


Related News: Neuregulin and Schizophrenia—Functional Failure Fingers Risk Allele

Comment by:  Amanda Jayne Law, SRF Advisor
Submitted 14 July 2007 Posted 15 July 2007

In response to Ali Mohamad Shariaty’s comment: Serum response factor (SRF) plays a key role in regulating the transcription of a number of genes involved in brain development. Genetic manipulation of SRF has revealed a direct role for it as a regulator of cortical and hippocampal function (e.g., Etkin et al., 2006) influencing both learning and memory. At the cellular level SRF has been shown to regulate dendritic morphology and neuronal migration. Therefore, SRF is indeed an important neurodevelopmental molecule, mediated via its regulation of genes, such as NRG1. Genetic variations that are predicted to interfere with SRF binding (such as the SNP characterized in our study) may affect critical aspects of brain development and function that contribute to schizophrenia. Since SRF regulates the expression of a number of genes, beyond that of NRG1, its involvement in schizophrenia is likely mediated “indirectly” via its effects on the regulation of genes associated with the disorder.

References:

Etkin A, Alarcón JM, Weisberg SP, Touzani K, Huang YY, Nordheim A, Kandel ER. A role in learning for SRF: deletion in the adult forebrain disrupts LTD and the formation of an immediate memory of a novel context. Neuron. 2006 Apr 6;50(1):127-43. Abstract

View all comments by Amanda Jayne Law


Related News: Neuregulin and Schizophrenia—Functional Failure Fingers Risk Allele

Comment by:  Robert Hunter
Submitted 17 July 2007 Posted 17 July 2007
  I recommend the Primary Papers

Related News: Down to BACE-ics—Old Mouse a New Model for Schizophrenia?

Comment by:  Victor ChongCynthia Shannon Weickert (SRF Advisor)
Submitted 23 May 2008 Posted 23 May 2008

The findings of Savonenko et al. (2008) are an impressive addition to the growing evidence supporting a role for neuregulin-1 (NRG1) in schizophrenia pathology. The authors not only revealed a novel relationship between schizophrenia-like behavior and the loss of BACE1 proteolytic function, but also showed that this association results from disruption of BACE1-mediated NRG1 cleavage. These observations support the notion that aberrant processing of NRG1 may contribute to the development of schizophrenia-like phenotypes, providing a basis for examining other NRG1-cleaving pathways in the context of schizophrenia. Savonenko et al. were thorough in their behavioral assessment of the BACE1 mutant mice, convincingly showing that these animals exhibit schizophrenia-related behaviors that could be exacerbated by psychostimulants and improved by antipsychotic drug treatment.

What remains unclear, however, is the relationship between the NRG1/ErbB4 protein findings in the BACE1 mutant mouse brain and those previously reported in the schizophrenic human brain. For example, the...  Read more


View all comments by Victor Chong
View all comments by Cynthia Shannon Weickert

Related News: Gene Expression Study May Open Window on Brain Development

Comment by:  Barbara Lipska
Submitted 15 June 2009 Posted 15 June 2009

In this very important and innovative study, Sestan and colleagues report a transcriptome-wide survey across multiple brain regions of the fetal mid-gestation brain. They show dramatic differences in expressed transcripts, including alternative splice variants, between brain regions, and most surprisingly, between several cortical regions. The authors have undertaken an ambitious task of further characterizing differentially expressed genes by functional clustering and co-expression clustering and comparing the results with genes identified through neurobiological experiments. They have also performed extensive validation using several additional fetal brains. Most interestingly, the authors showed that differentially expressed genes are more frequently associated with human-specific evolution of putative cis-regulatory elements. For this, they have identified genes that are near highly conserved non-coding sequences (CNSs) and found that the genes that are differentially expressed between the regions are more frequently near human-specific accelerated evolution CNSs.

The...  Read more


View all comments by Barbara Lipska

Related News: Gene Expression Study May Open Window on Brain Development

Comment by:  Karoly Mirnics, SRF Advisor
Submitted 15 June 2009 Posted 15 June 2009

This outstanding study reinforces how much we still do not understand about human brain development and function! It is just mind-boggling that the mid-fetal human brain expresses more than three quarters of the human genome, and that region-specific splicing appears to be an absolutely critical feature of the developing brain. Interestingly, the structural and functional interhemispheric differences do not appear to be related to gene expression differences in mid-fetal life, but rather, either they develop independently of gene expression patterns, or they are developing at later stages of cortical maturation, perhaps in a postnatal activity-driven pattern.

So, how is this developmental expression machinery related to various neurodevelopmental disorders, such as schizophrenia? Is usage of an "inappropriate" splice variant sufficient to alter the neuronal phenotypic development to a degree that would predispose the brain to developing a disease? Are environmental insults capable of disrupting this finely tuned, region-specific splicing machinery? As this is a likely...  Read more


View all comments by Karoly Mirnics

Related News: Researchers Model Susceptibility to Schizophrenia in a Petri Dish

Comment by:  Alan Mackay-Sim
Submitted 13 April 2011 Posted 13 April 2011

With a heritability of 50 percent, schizophrenia is very clearly a disease of disturbed biology, but to dissect the biological contribution to its etiology, researchers need relevant, patient-derived cell models. Ideally, we need cell models that can tell us how schizophrenia cell biology leads to an altered brain. Induced pluripotent stem (iPS) cells are genetically engineered cells, from a patient's cells (e.g., fibroblasts), that resemble embryonic stem cells, that can be used to generate neurons. There is much excitement that they will be useful as models for many brain disorders and diseases. Two new papers in Molecular Psychiatry and Nature report on applying iPS cell technology to schizophrenia by generating iPS cells from patients with a DISC1 mutation (Chiang et al., 2011) and from patients selected with a high likelihood of a genetic component to disease (Brennand et al., 2011).

When specific genes are implicated, then animal models can provide breakthroughs by determining the cellular functions of the implicated genes and their mutations. Although...  Read more


View all comments by Alan Mackay-Sim

Related News: Researchers Model Susceptibility to Schizophrenia in a Petri Dish

Comment by:  Akira Sawa, SRF Advisor
Submitted 13 April 2011 Posted 13 April 2011

I fully appreciate the efforts of Brennand and colleagues as pioneers. Indeed, this is great work. Like any pioneering work, this paper will be both applauded and criticized. The strength of the paper is in providing ways for us to analyze iPS cells and derived neurons. The multifaceted approach taken in this study will be a great platform for many investigators.

Schizophrenia is, clinically, a very heterogeneous condition, but for the past several years, basic scientists have tended to oversimplify the disorder. It is also true that this trend makes the neurobiology of schizophrenia move productively forward in some ways. I believe that the new tools for studying the biology of schizophrenia, such as iPSC-derived neurons, will teach us how difficult it is to draw simplified pathways for the disorder. Nonetheless, some common pathway(s) may be identified in the future, I optimistically hope.

Based on the great experimental procedures that this paper provides, many other groups may need to address whether or not these data are reproducible or not in “general” cases of...  Read more


View all comments by Akira Sawa

Related News: Neuregulin and ErbB4: Synaptic Jacks of All Trades

Comment by:  Michael CahillPeter Penzes
Submitted 29 April 2011 Posted 29 April 2011
  I recommend the Primary Papers

The recent study by Pitcher et al. provides a novel mechanism linking NRG1/ErbB4 activity to the suppression of NMDAR activity in a manner requiring Src kinase inhibition. The study uses biochemical manipulation of Src activation, as well as studies on cells lacking Src, to examine the role for Src kinase on the effects of NRG1 on NMDAR responses in pyramidal neurons. Overall, the study provides convincing evidence indicating that Src inhibition by NRG1 is an important contributor to the effects of NRG1 on NMDAR pyramidal neuronal hypofunction. The effect of NRG1 and ErbB4 on Src family kinase activation remains complex. Previous studies have found that NRG1 can activate Src, and that inhibition of Src family kinases can block some of the effects of NRG1 on cells, including cellular migration and proliferation (Eckert et al., 2009; Grossmann et al., 2009). Moreover, ErbB4 activity is able to activate fyn when overexpressed in heterologous cells, and NRG1 treatment activates fyn in...  Read more


View all comments by Michael Cahill
View all comments by Peter Penzes
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